Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LAML rs826558 chr2:109364443 T/C 0.000118 111 13.15 19.8 0 KM Plot
LAML rs872151 chr2:136556805 C/T 3.84E-7 111 19.23 7.12 0.5 KM Plot
LAML rs874709 chr5:172022097 A/C 0.00014 109 0 11.67 16.27 KM Plot
LAML rs877661 chr6:127587915 T/G 3.17E-5 108 0.98 16.23 15.17 KM Plot
LAML rs880931 chr2:238396741 G/A 0.000114 111 13.1 20.27 0 KM Plot
LAML rs886807 chr2:242401493 T/G 8.12E-5 109 1.53 14.63 17.23 KM Plot
LAML rs886808 chr2:242400745 C/G 8.12E-5 109 1.53 14.63 17.23 KM Plot
LAML rs889142 chr19:48260079 T/C 1.82E-7 106 5.1 22.37 15.73 KM Plot
LAML rs894797 chr7:135628919 T/C 0.000137 109 13.15 27.93 0 KM Plot
LAML rs896932 chr2:3209598 A/G 5.94E-5 111 0 14.7 15.2 KM Plot
LAML rs910720 chr6:127619070 T/C 1.86E-5 111 0.98 16.27 15.17 KM Plot
LAML rs9285459 chr6:127631113 T/C 1.86E-5 111 0.98 16.27 15.17 KM Plot
LAML rs9285460 chr6:127640190 A/G 1.86E-5 111 0.98 16.27 15.17 KM Plot
LAML rs9321073 chr6:127609691 C/T 1.86E-5 111 0.98 16.27 15.17 KM Plot
LAML rs9321074 chr6:127618019 G/A 1.86E-5 111 0.98 16.27 15.17 KM Plot